SRX8512932
GSM4604902: WT-Ovary-Brm-ChIP; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
brm

Cell type

Cell type Class
Adult
Cell type
Ovary
NA
NA

Attributes by original data submitter

Sample

source_name
Drosophila ovary
tissue
ovary
genotype/variation
WT
chip antibody
anti-Brm
provider/vender
gift from Susumu Hirose in NIG, Japan.
memo
10.1242/dev.083246

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
DNA libraries were raised using NEBNext UltraⅡFS DNA Library Prep Kit (NEB) according to the manufacturer's instructions.

Sequencing Platform

instrument_model
Illumina MiSeq

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
1699806
Reads aligned (%)
100.0
Duplicates removed (%)
67.0
Number of peaks
1307 (qval < 1E-05)

dm3

Number of total reads
1699806
Reads aligned (%)
100.0
Duplicates removed (%)
66.8
Number of peaks
1419 (qval < 1E-05)

Base call quality data from DBCLS SRA